SCREEN: Search Candidate cis-Regulatory Elements by ENCODE

Search Candidate cis-Regulatory Elements

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Enter a gene, cCRE, variant, GWAS, or locus

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Multiple Region Search

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Where to start?

Browse these example searches to get started with SCREEN. You can search for genes, cCREs, variants, a specific loci, or a study from the GWAS catalog. Change the assembly above to see different examples.

chr6:21,592,768-21,598,619

Gene: SOX4

chr19:50,417,519-50,417,853

cCRE: EH38E3314260

chr6:21,298,226-21,298,227

Variant: rs9466027

chr12:53,380,176-53,416,446

Region: chr12:53,380,176-53,416,446

Foss-Skiftesvik J

GWAS: Astrocytoma

chr19:44,905,754-44,909,393

Gene: APOE

GWAS

Genome Wide Associated Studies

Explore all Genome Wide Associated Studies (GWAS) and search studies by category.

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Access SCREEN Data Instantly!

Download comprehensive datasets of candidate cis-regulatory elements (cCREs) from ENCODE for in-depth analysis.

Available Downloads

✅ cCRE Annotations

✅ Data Matrices across multiple assays

✅ cCREs downloads by Genomic Region

Go to Downloads

📈 Trending Datasets

All Human cCREs

2,348,854 cCREs • 1,888 cell types

129.1 MB

Human Promoters

47,532 cCREs

2.6 MB

Human Enhancers

1,718,669 cCREs

94.4 MB

All Mouse cCREs

926,843 cCREs • 366 cell types

50.6 MB

Mouse Promoters

27,332 cCREs

1.5 MB

Mouse Enhancers

512,001 cCREs

28.2 MB